Yesterday the group met for this semesters first meeting. My task for the next week is to complete my task that I have been working on. This means making random synonymous changes and seeing if there is any connection between the generated k-mer frequency score and the folding energy of the molecule.
Edit:
Unfortunately this appears to have been saved as a draft rather than being posted which is why it is appearing late. This week I have reached the point where I am ready to start the experiments. I successfully made random synonymous changes and have installed working versions of Unafold and gnuplot to work with. However, Unafold is currently not cooperating so I am trying to figure out what I need to change to get it to work.
Edit:
Unfortunately this appears to have been saved as a draft rather than being posted which is why it is appearing late. This week I have reached the point where I am ready to start the experiments. I successfully made random synonymous changes and have installed working versions of Unafold and gnuplot to work with. However, Unafold is currently not cooperating so I am trying to figure out what I need to change to get it to work.